STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV27679.1Two component transcriptional regulator, LuxR family. (227 aa)    
Predicted Functional Partners:
SBV27680.1
Signal transduction histidine kinase.
 
  0.943
SBV28616.1
Signal transduction histidine kinase.
   
 0.865
SBV24879.1
Signal transduction histidine kinase.
  
  0.840
SBV25568.1
Signal transduction histidine kinase.
  
  0.838
SBV26104.1
Signal transduction histidine kinase.
  
  0.838
SBV30759.1
Signal transduction histidine kinase.
  
  0.837
SBV24816.1
Signal transduction histidine kinase.
  
  0.836
SBV26261.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.836
SBV27687.1
Signal transduction histidine kinase.
 
  0.827
SBV25112.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.826
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.