STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV27997.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SBV27998.1
Transcriptional regulator, PadR family.
 
     0.895
SBV24786.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
  
     0.612
SBV27999.1
Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
       0.599
SBV25485.1
ABC-2 type transporter.
   
 
 0.586
SBV25486.1
ABC-type multidrug transport system, ATPase component.
   
 
 0.586
SBV26756.1
Protein phosphatase.
  
 
 0.585
SBV28644.1
Protein phosphatase.
  
 
 0.585
SBV28822.1
Protein phosphatase.
  
 
 0.585
SBV29292.1
Hypothetical protein.
  
 
 0.585
SBV28674.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.573
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.