STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV28070.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SBV28071.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
    0.795
SBV27196.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.699
SBV28827.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.699
SBV28909.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.699
SBV28069.1
Hypothetical protein.
       0.631
SBV28937.1
Protein of unknown function.
  
 
   0.604
SBV27941.1
Hypothetical protein.
  
  0.583
SBV28072.1
Protein of unknown function.
       0.548
SBV27597.1
Alpha-1,2-mannosyltransferase.
  
 
   0.544
SBV29085.1
Putative hydrolase.
  
     0.539
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.