STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV29293.1Protein N-acetyltransferase, RimJ/RimL family. (169 aa)    
Predicted Functional Partners:
SBV29887.1
Winged helix-turn helix; Manually curated.
  
     0.707
SBV27873.1
Hypothetical protein.
  
    0.664
SBV30381.1
Hypothetical protein.
  
     0.643
SBV29942.1
Hypothetical protein.
  
     0.624
SBV29840.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.605
SBV27254.1
Hypothetical protein.
  
     0.602
SBV28779.1
Hypothetical protein.
  
    0.590
SBV26822.1
Hypothetical protein.
  
     0.573
SBV26201.1
Arylsulfatase A.
  
     0.565
SBV25756.1
Hypothetical protein.
  
     0.555
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.