STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV30238.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SBV30237.1
Sugar phosphate isomerase/epimerase.
     0.995
SBV30239.1
Hypothetical protein.
 
    0.965
SBV30236.1
4-hydroxybenzoate polyprenyltransferase.
 
     0.962
SBV30235.1
Myo-inositol-1-phosphate synthase.
 
     0.959
SBV30240.1
Sugar phosphate isomerase/epimerase.
 
     0.957
SBV30241.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
     0.918
SBV30243.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.838
SBV25797.1
PKD domain-containing protein.
 
   
 0.794
SBV25195.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
   
 0.793
SBV25321.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
   
 0.791
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.