STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV30718.1Signal transduction histidine kinase. (846 aa)    
Predicted Functional Partners:
SBV28616.1
Signal transduction histidine kinase.
  
 0.967
SBV30719.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
     0.896
SBV30720.1
Protein of unknown function.
 
     0.894
SBV30721.1
Hypothetical protein.
 
     0.881
SBV25676.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.878
SBV30716.1
Terpene synthase family, metal binding domain.
 
     0.846
SBV29964.1
Hypothetical protein.
 
     0.784
SBV30717.1
Prenyltransferase and squalene oxidase repeat-containing protein.
 
     0.780
SBV29965.1
Protein of unknown function.
 
     0.778
SBV28187.1
Protein of unknown function.
 
     0.776
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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