Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV25676.1 | SBV28616.1 | GA0070620_1153 | GA0070620_4163 | PAS/PAC sensor hybrid histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SBV25676.1 | SBV29456.1 | GA0070620_1153 | GA0070620_5028 | PAS/PAC sensor hybrid histidine kinase. | HAMP domain-containing protein. | 0.999 |
SBV25676.1 | SBV30895.1 | GA0070620_1153 | GA0070620_6501 | PAS/PAC sensor hybrid histidine kinase. | AAA ATPase domain-containing protein. | 0.477 |
SBV28616.1 | SBV25676.1 | GA0070620_4163 | GA0070620_1153 | Signal transduction histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
SBV28616.1 | SBV29456.1 | GA0070620_4163 | GA0070620_5028 | Signal transduction histidine kinase. | HAMP domain-containing protein. | 0.999 |
SBV28616.1 | SBV30895.1 | GA0070620_4163 | GA0070620_6501 | Signal transduction histidine kinase. | AAA ATPase domain-containing protein. | 0.512 |
SBV29456.1 | SBV25676.1 | GA0070620_5028 | GA0070620_1153 | HAMP domain-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
SBV29456.1 | SBV28616.1 | GA0070620_5028 | GA0070620_4163 | HAMP domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SBV29456.1 | SBV30895.1 | GA0070620_5028 | GA0070620_6501 | HAMP domain-containing protein. | AAA ATPase domain-containing protein. | 0.423 |
SBV30894.1 | SBV30895.1 | GA0070620_6500 | GA0070620_6501 | Hippurate hydrolase. | AAA ATPase domain-containing protein. | 0.520 |
SBV30894.1 | SBV30896.1 | GA0070620_6500 | GA0070620_6502 | Hippurate hydrolase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.520 |
SBV30895.1 | SBV25676.1 | GA0070620_6501 | GA0070620_1153 | AAA ATPase domain-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.477 |
SBV30895.1 | SBV28616.1 | GA0070620_6501 | GA0070620_4163 | AAA ATPase domain-containing protein. | Signal transduction histidine kinase. | 0.512 |
SBV30895.1 | SBV29456.1 | GA0070620_6501 | GA0070620_5028 | AAA ATPase domain-containing protein. | HAMP domain-containing protein. | 0.423 |
SBV30895.1 | SBV30894.1 | GA0070620_6501 | GA0070620_6500 | AAA ATPase domain-containing protein. | Hippurate hydrolase. | 0.520 |
SBV30895.1 | SBV30896.1 | GA0070620_6501 | GA0070620_6502 | AAA ATPase domain-containing protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.773 |
SBV30895.1 | SBV30897.1 | GA0070620_6501 | GA0070620_6503 | AAA ATPase domain-containing protein. | TIGR03083 family protein. | 0.654 |
SBV30896.1 | SBV30894.1 | GA0070620_6502 | GA0070620_6500 | Pimeloyl-ACP methyl ester carboxylesterase. | Hippurate hydrolase. | 0.520 |
SBV30896.1 | SBV30895.1 | GA0070620_6502 | GA0070620_6501 | Pimeloyl-ACP methyl ester carboxylesterase. | AAA ATPase domain-containing protein. | 0.773 |
SBV30896.1 | SBV30897.1 | GA0070620_6502 | GA0070620_6503 | Pimeloyl-ACP methyl ester carboxylesterase. | TIGR03083 family protein. | 0.539 |
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