Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC112145979Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
raver2
Ribonucleoprotein, PTB-binding 2.
   
    0.651
LOC112154083
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.448
ENSOMEP00000025597
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.448
ENSOMEP00000025633
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.448
ENSOMEP00000033953
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.448
ENSOMEP00000012258
Vav 3 guanine nucleotide exchange factor b.
    
 0.446
ntng1
Netrin g1a.
    
 0.446
LOC112143674
Ig-like domain-containing protein.
      
 0.439
pidd1
P53-induced death domain protein 1.
    
  0.408
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.