STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112146144Olfactomedin 2a. (483 aa)    
Predicted Functional Partners:
LOC112161425
Homeobox protein.
      
 0.483
bcl6
BCL6A transcription repressor a.
      
 0.468
tenm4
Teneurin transmembrane protein 4.
   
 
 0.442
LOC112139726
Si:dkey-237h12.3.
   
 
 0.442
ENSOMEP00000034643
Uncharacterized protein.
   
 
 0.442
tenm1
Teneurin transmembrane protein 1.
   
 
 0.440
TENM2
Teneurin transmembrane protein 2.
   
 
 0.437
ENSOMEP00000000473
Unc-5 netrin receptor C.
   
   0.427
LOC112163020
Unc-5 netrin receptor C.
   
   0.427
ENSOMEP00000013812
Unc-5 netrin receptor Da.
   
   0.423
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.