STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112146866Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1934 aa)    
Predicted Functional Partners:
ENSOMEP00000000476
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.775
ENSOMEP00000006927
Myosin, light chain 13.
   
 0.775
ENSOMEP00000034056
Uncharacterized protein.
   
 0.752
ENSOMEP00000024371
Uncharacterized protein.
   
 0.751
LOC112144677
Uncharacterized protein.
   
 0.749
ENSOMEP00000016231
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.749
LOC112151429
Uncharacterized protein.
   
 0.735
LOC112144837
Myosin, light chain 9b, regulatory.
   
 0.735
LOC112147542
Uncharacterized protein.
   
 0.735
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.730
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.