STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112161851Asparaginase like 1. (342 aa)    
Predicted Functional Partners:
asns
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.907
LOC112140585
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.892
LOC112162129
Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.892
got2
Aspartate aminotransferase.
   
 
 0.889
GOT1
Aspartate aminotransferase.
   
 
 0.887
got1
Aspartate aminotransferase.
   
 
 0.886
LOC112161880
Si:dkey-103j14.5.
  
  
 
0.882
aspa
Aspartoacylase.
   
 
  0.880
ftcd
Formimidoyltransferase cyclodeaminase.
     
 0.879
LOC112146872
Si:ch211-256m1.8.
   
 
 
0.878
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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