close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001004Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
   
 0.999
LOC112158078
Uncharacterized protein.
   
 0.977
faap24
FA core complex associated protein 24.
    
 0.969
fancl
FA complementation group L.
    
 0.960
ENSOMEP00000020292
FA complementation group C.
    
 0.958
FANCG
FA complementation group G.
    
 0.958
fancf
FA complementation group F.
    
 0.958
fancb
FA complementation group B.
    
 0.955
ENSOMEP00000031829
Uncharacterized protein.
   
 0.935
ENSOMEP00000031473
Proliferation associated nuclear element.
   
 0.923
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.