STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001024Oxysterol-binding protein; Belongs to the OSBP family. (734 aa)    
Predicted Functional Partners:
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.751
LOC112145135
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.751
ENSOMEP00000010428
MSP domain-containing protein.
    
 0.688
VAPB
VAMP associated protein B and C.
    
 0.688
mospd1
Motile sperm domain containing 1.
    
 0.653
gak
Cyclin G associated kinase.
   
 
 0.531
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.443
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
  0.416
spata5l1
Spermatogenesis associated 5-like 1.
   
  0.404
SPATA5
Spermatogenesis associated 5.
   
  0.404
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.