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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ephb4Eph receptor B4a. (984 aa)    
Predicted Functional Partners:
ENSOMEP00000010591
Uncharacterized protein.
   
 0.784
ENSOMEP00000021778
Uncharacterized protein.
   
 0.784
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
 0.757
LOC112155750
Ephrin-B3a; Belongs to the ephrin family.
   
 0.755
LOC112155310
Ephrin-B2a; Belongs to the ephrin family.
   
 0.744
LOC112160207
Par-6 family cell polarity regulator gamma b.
    
 0.731
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.722
LOC112136134
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.722
ENSOMEP00000009363
Uncharacterized protein.
   
 0.718
ENSOMEP00000009387
Uncharacterized protein.
   
 0.718
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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