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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rims4Regulating synaptic membrane exocytosis 4. (271 aa)    
Predicted Functional Partners:
LOC112159975
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.670
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.670
ENSOMEP00000004401
Uncharacterized protein.
    
 0.656
ENSOMEP00000008348
Unc-13 homolog Ba (C. elegans).
    
 0.656
ENSOMEP00000012128
C2 domain-containing protein.
    
 0.656
UNC13C
Unc-13 homolog C.
    
 0.656
ENSOMEP00000018641
Uncharacterized protein.
    
 0.656
ENSOMEP00000027177
Uncharacterized protein.
    
 0.656
ENSOMEP00000027264
C2 domain-containing protein.
    
 0.656
ENSOMEP00000029708
Uncharacterized protein.
    
 0.656
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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