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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001138Uncharacterized protein. (1905 aa)    
Predicted Functional Partners:
ENSOMEP00000009290
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.842
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.814
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.805
ENSOMEP00000024767
Uncharacterized protein.
    
 0.805
pot1
Protection of telomeres 1 homolog.
    
 
 0.794
c7
Complement component 7a.
   
 0.779
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.692
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.647
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.647
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.626
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.