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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfip1ADP-ribosylation factor interacting protein 1 (arfaptin 1). (473 aa)    
Predicted Functional Partners:
ENSOMEP00000035962
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.903
LOC112151873
Uncharacterized protein.
    
 0.890
ENSOMEP00000033686
Uncharacterized protein.
    
 0.865
LOC112138669
Uncharacterized protein.
    
 0.808
ENSOMEP00000009897
ADP-ribosylation factor 6a.
    
 0.673
ENSOMEP00000035420
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.673
rac2
Rac family small GTPase 2.
   
 0.640
RAC1
Rac family small GTPase 1a.
   
 0.640
LOC112146455
Uncharacterized protein.
   
 0.640
LOC112162359
Rac family small GTPase 3b.
   
 0.640
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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