Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dchs2Uncharacterized protein. (3256 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.768
LOC112137279
Junction plakoglobin a.
    
 0.727
LOC112161708
Uncharacterized protein.
    
 0.727
fjx1
Four-jointed box kinase 1.
   
 
 0.668
LOC112153151
Catenin (cadherin-associated protein), alpha 1.
    
 0.658
LOC112161886
Uncharacterized protein.
    
 0.658
ENSOMEP00000026743
Catenin (cadherin-associated protein), alpha 2.
    
 0.658
ush1c
Usher syndrome 1C.
   
 
 0.651
ENSOMEP00000001706
Si:dkey-1m11.5.
   
 
 0.605
ENSOMEP00000001708
Uncharacterized protein.
   
 
 0.605
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.