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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112162844Gamma-glutamyltransferase 1b. (590 aa)    
Predicted Functional Partners:
LOC112163507
Uncharacterized protein.
  
 
 
0.975
LOC112150425
Peroxiredoxin 6.
  
 
 0.974
LOC112147411
Thioredoxin domain-containing protein.
  
 
 0.974
ENSOMEP00000009320
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.974
gpx8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.974
chac2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
 
 0.973
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
    
  0.972
gss
Glutathione synthetase.
   
 
 0.944
oplah
5-oxoprolinase, ATP-hydrolysing.
    
 0.936
gsr
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.935
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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