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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssh1Slingshot protein phosphatase 1a. (1034 aa)    
Predicted Functional Partners:
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
    
 0.950
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
    
 0.948
LOC112162269
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.911
LOC112152891
ADF-H domain-containing protein.
    
 0.911
ppp3r1
Uncharacterized protein.
    
  0.706
ENSOMEP00000022729
Slingshot protein phosphatase 1b.
  
  
 
0.704
LOC112142429
Slingshot protein phosphatase 2b.
  
  
 
0.701
ssh2
Slingshot protein phosphatase 2a.
  
  
 
0.698
LOC112153492
Si:ch211-203d1.3.
  
  
 
0.696
stk38
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.649
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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