STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001385Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
ENSOMEP00000018579
Uncharacterized protein.
 
 
 0.989
ENSOMEP00000034018
Uncharacterized protein.
 
 
0.959
ENSOMEP00000007492
Si:zfos-1837d3.1.
 
  
  0.931
ENSOMEP00000035866
Uncharacterized protein.
 
     0.920
SPTBN1
Spectrin beta, non-erythrocytic 1.
 
  
 
0.911
ENSOMEP00000026664
Calponin-homology (CH) domain-containing protein.
 
   
  0.839
ENSOMEP00000018613
Uncharacterized protein.
   
 0.788
ENSOMEP00000018618
Uncharacterized protein.
   
 0.788
ENSOMEP00000022646
Spectrin, beta, non-erythrocytic 2.
 
     0.681
ENSOMEP00000009363
Uncharacterized protein.
     
 0.624
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.