Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pxmp2Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (194 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
    
 0.987
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.884
pex3
Peroxisomal biogenesis factor 3.
   
 
 0.881
pxmp4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.870
LOC112152918
Peroxisomal biogenesis factor 11 alpha.
   
 
 0.818
ENSOMEP00000007530
Peroxisomal biogenesis factor 11 beta.
   
 
 0.818
pex13
SH3 domain-containing protein.
   
 
 0.762
LOC112158905
ATP-binding cassette, sub-family D (ALD), member 1.
    
 0.746
pex6
Peroxisomal biogenesis factor 6.
     
 0.744
atad1
ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.
   
 
 0.742
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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