STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapl1Death associated protein 1b. (116 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.994
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
   0.897
ENSOMEP00000002517
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.897
ENSOMEP00000005353
Ribosomal protein L34.
    
   0.897
ENSOMEP00000005743
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.897
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
    
   0.897
ENSOMEP00000008366
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
   0.897
rpl28
Ribosomal protein L28.
    
   0.897
ENSOMEP00000008644
Ribosomal protein L37; Binds to the 23S rRNA.
    
   0.897
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
   0.897
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.