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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112150134Uncharacterized protein. (980 aa)    
Predicted Functional Partners:
LOC112143872
Fibronectin type-III domain-containing protein.
  
 0.814
LOC112143724
Interleukin 11a.
    
 0.765
LOC112152829
Uncharacterized protein.
  
  
 0.764
ebi3
Epstein-Barr virus induced 3.
   
 0.751
LOC112163102
Uncharacterized protein.
   
 0.751
LOC112136115
Ciliary neurotrophic factor receptor.
   
0.751
il10
Interleukin 10.
   
 
 0.713
LOC112144620
Signal transducer and activator of transcription.
    
 0.698
stat3
Signal transducer and activator of transcription.
    
 0.698
ENSOMEP00000033525
SH2 domain-containing protein.
    
 0.698
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.