STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112144503Prostaglandin I2 (prostacyclin) synthase; Belongs to the cytochrome P450 family. (470 aa)    
Predicted Functional Partners:
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
   
 
0.977
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 0.930
ENSOMEP00000019987
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase); Belongs to the terpene cyclase/mutase family.
  
 0.928
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.928
LOC112163152
EGF-like domain-containing protein.
   
 0.921
LOC112148723
Prostaglandin-endoperoxide synthase 1.
   
 0.921
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
 0.911
LOC112159573
Prostaglandin E synthase 3a (cytosolic).
     
 0.911
ptges
Prostaglandin E synthase.
   
 
 0.910
ptges2
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
     
 0.908
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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