STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112150931Hydroxysteroid (17-beta) dehydrogenase 7. (354 aa)    
Predicted Functional Partners:
nsdhl
NAD(P) dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family.
   
 0.987
LOC112153430
Phosphoethanolamine methyltransferase.
    
 0.987
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.984
LOC112148369
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 0.982
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.977
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.958
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.956
ENSOMEP00000019987
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase); Belongs to the terpene cyclase/mutase family.
   
 
 0.954
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.954
LOC112160724
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
    
 0.947
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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