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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001495Iron-sulfur cluster assembly enzyme b; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. (165 aa)    
Predicted Functional Partners:
nfs1
NFS1 cysteine desulfurase.
 
 0.998
ENSOMEP00000029968
Selenocysteine lyase.
 
 0.997
ENSOMEP00000013992
Aminotran_5 domain-containing protein.
  
 0.996
ENSOMEP00000014018
MOSC domain-containing protein.
  
 0.996
FXN
Frataxin.
    
 0.983
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
    
 0.977
fdx2
Ferredoxin 2.
 
 0.937
FDX1
Ferredoxin 1.
  
 0.922
isca1
Iron-sulfur cluster assembly 1.
  
  
 0.913
isca2
Iron-sulfur cluster assembly 2.
  
  
 0.913
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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