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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001508Uncharacterized protein. (378 aa)    
Predicted Functional Partners:
LOC112160460
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.952
LOC112139984
Cytochrome c-1.
   
 0.948
ENSOMEP00000005758
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.939
LOC112163265
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.922
LOC112154566
Uncharacterized protein.
   
 0.894
LOC112146881
Ubiquinol-cytochrome c reductase core protein 2a.
   
 0.894
LOC112159278
Ubiquinol-cytochrome c reductase core protein 1.
   
 0.880
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
   
 0.880
LOC112141911
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.871
ENSOMEP00000020923
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.871
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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