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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001530Neural cell adhesion molecule 1a. (786 aa)    
Predicted Functional Partners:
ENSOMEP00000009465
Uncharacterized protein.
   
0.909
ENSOMEP00000016519
L1 cell adhesion molecule, paralog a.
   
0.909
ncam1
Neural cell adhesion molecule 1b.
  
  
 
0.891
cntn2
Contactin 2.
   
0.700
ENSOMEP00000004746
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
   
 
 0.699
ENSOMEP00000031446
Agrin.
     
 0.637
LOC112148809
Uncharacterized protein.
     
 0.630
LOC112161518
GDNF family receptor alpha 1.
     
 0.630
LOC112147329
Uncharacterized protein.
   
 0.613
ENSOMEP00000030332
Neurocan b.
   
 0.613
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.