STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001532C-type lectin domain-containing protein. (210 aa)    
Predicted Functional Partners:
LOC112143713
Si:dkey-26c10.5.
    
 0.714
LOC112143707
Si:dkey-26c10.5.
    
0.714
LOC112156051
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
 0.674
ENSOMEP00000011943
Protein tyrosine phosphatase non-receptor type 6.
   
  0.576
LOC112159720
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.576
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.576
ENSOMEP00000033429
Uncharacterized protein.
   
 0.562
LOC112137331
Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.539
ENSOMEP00000024199
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.539
tnn
Tenascin N.
   
  0.530
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.