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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001533Solute carrier family 38 member 8b. (417 aa)    
Predicted Functional Partners:
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
   
 
  0.659
LOC112142776
Ras-related GTP binding A.
   
 0.656
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.654
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.648
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
  0.639
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
  0.639
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
  0.605
LOC112160390
SIN3 transcription regulator family member Ab.
    
 0.605
ENSOMEP00000008289
C2 domain-containing protein.
   
 
  0.605
ENSOMEP00000008322
Uncharacterized protein.
   
 
  0.605
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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