STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001587Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
ENSOMEP00000002332
Uncharacterized protein.
    
 0.718
LOC112145203
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.718
ENSOMEP00000010700
PDZ domain-containing protein.
    
 0.718
LOC112159001
Uncharacterized protein.
    
0.718
ENSOMEP00000023254
PDZ domain-containing protein.
    
 0.718
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.715
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.710
ENSOMEP00000010571
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.709
ENSOMEP00000010197
Protein kinase C, zeta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.679
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.679
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (28%) [HD]