STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112145308Calcium/calmodulin-dependent protein kinase Ia; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.930
calm2-2
Calmodulin 3.
   
 0.930
calm2-3
Calmodulin 3.
   
 0.930
calml4
Calmodulin-like 4a.
   
 0.888
ENSOMEP00000009674
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.832
atf4
Activating transcription factor 4a.
   
  0.687
ENSOMEP00000005257
Phospholipase A2.
    
 0.684
nos1
Nitric oxide synthase 1 (neuronal).
   
 0.660
creb3l1
cAMP responsive element binding protein 3-like 1.
    
 0.646
creb3l4
BZIP domain-containing protein.
    
  0.643
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.