STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (223 aa)    
Predicted Functional Partners:
ENSOMEP00000000116
Ribonuclease P/MRP 14 subunit.
    
 0.999
pop1
POP1 homolog, ribonuclease P/MRP subunit.
   
 0.999
ENSOMEP00000011312
Ribonuclease P 21 subunit.
    
 0.999
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.999
rpp40
Ribonuclease P/MRP 40 subunit.
    
 0.998
rpp38
Ribonuclease P/MRP 38 subunit.
   
 0.998
ENSOMEP00000013925
Ribonuclease P and MRP subunit p25, b.
    
 0.998
ENSOMEP00000011337
Uncharacterized protein.
   
 0.995
ENSOMEP00000030717
Uncharacterized protein.
   
 0.995
ENSOMEP00000030056
Alba domain-containing protein.
    
 0.988
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.