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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001634AAA_6 domain-containing protein. (232 aa)    
Predicted Functional Partners:
ENSOMEP00000030661
Dynein, cytoplasmic 1, heavy chain 1.
 
   
  0.986
ENSOMEP00000013536
Uncharacterized protein.
 
   
  0.951
ENSOMEP00000010412
AAA_6 domain-containing protein.
 
 
  0.941
ENSOMEP00000010432
AAA_6 domain-containing protein.
 
 
  0.937
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.937
LOC112147348
Dynein, cytoplasmic 1, intermediate chain 2b.
   
 0.936
ENSOMEP00000001624
AAA_9 domain-containing protein.
 
     0.935
dync1i2
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.935
ENSOMEP00000010378
AAA_9 domain-containing protein.
 
 
  0.935
ENSOMEP00000023693
AAA_6 domain-containing protein.
 
 
  0.934
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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