STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhobtb3Si:dkey-6b12.5. (619 aa)    
Predicted Functional Partners:
ENSOMEP00000009363
Uncharacterized protein.
    
 0.955
ENSOMEP00000009387
Uncharacterized protein.
    
 0.955
ENSOMEP00000015987
Uncharacterized protein.
    
 0.955
ENSOMEP00000016023
Uncharacterized protein.
    
 0.955
ENSOMEP00000027877
Uncharacterized protein.
    
 0.955
ENSOMEP00000032288
Uncharacterized protein.
    
 0.955
ENSOMEP00000014699
Uncharacterized protein.
    
 0.922
ENSOMEP00000014715
Intersectin 1 (SH3 domain protein).
    
 0.922
ENSOMEP00000010591
Uncharacterized protein.
   
 0.840
ENSOMEP00000021778
Uncharacterized protein.
   
 0.840
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.