close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a11Solute carrier family 38 member 11. (437 aa)    
Predicted Functional Partners:
LOC112142776
Ras-related GTP binding A.
   
 0.791
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.781
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.768
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.767
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.764
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.671
LOC112162286
Uncharacterized protein.
    
 0.669
rragc
Ras-related GTP binding Ca.
    
 0.669
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
  0.609
ENSOMEP00000008289
C2 domain-containing protein.
   
 
  0.609
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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