STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001675Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
ENSOMEP00000016044
Dynein light chain.
  
     0.505
ENSOMEP00000008428
Uncharacterized protein.
  
     0.499
ENSOMEP00000008456
Uncharacterized protein.
  
     0.499
ENSOMEP00000018141
Uncharacterized protein.
  
     0.491
ENSOMEP00000010975
Uncharacterized protein.
  
     0.488
ENSOMEP00000016702
Uncharacterized protein.
  
     0.487
ENSOMEP00000033116
Uncharacterized protein.
  
     0.487
ENSOMEP00000007506
Uncharacterized protein.
  
     0.479
ENSOMEP00000003165
Uncharacterized protein.
  
     0.477
ENSOMEP00000032659
Uncharacterized protein.
  
     0.475
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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