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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001688Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
LOC112147644
Uncharacterized protein.
  
     0.484
ENSOMEP00000034277
Uncharacterized protein.
  
     0.465
LOC112143505
Si:dkeyp-69b9.6.
  
     0.459
ENSOMEP00000015692
Uncharacterized protein.
  
     0.450
LOC112149645
Si:ch211-137a8.4.
  
     0.450
ENSOMEP00000035067
Uncharacterized protein.
  
     0.450
LOC112140203
Uncharacterized protein.
  
     0.442
LOC112156936
Ciliary neurotrophic factor.
  
     0.434
LOC112143136
Uncharacterized protein.
  
     0.434
LOC112155845
Si:ch211-212k18.5.
  
     0.427
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.