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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxn4Forkhead box N4. (514 aa)    
Predicted Functional Partners:
ENSOMEP00000007480
PX domain-containing protein.
    
 0.666
ENSOMEP00000007491
Serum/glucocorticoid regulated kinase family member 3.
    
 0.666
suox
Sulfite oxidase.
     
 0.666
sting1
Transmembrane protein 173.
    
  0.572
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.567
ptf1a
Pancreas associated transcription factor 1a.
   
 
 0.554
barhl2
BarH-like homeobox 2.
   
 
 0.551
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.549
ENSOMEP00000003069
Uncharacterized protein.
    
 0.541
LOC112146043
E1A binding protein p300 b.
    
 0.541
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.