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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufuSuppressor of fused homolog. (471 aa)    
Predicted Functional Partners:
ENSOMEP00000001575
Serine/threonine kinase 36 (fused homolog, Drosophila).
    
 0.984
ENSOMEP00000014970
Unc-51 like kinase 4.
    
 0.984
LOC112156737
GLI family zinc finger 2b.
    
 0.982
gli1
GLI family zinc finger 1.
    
 0.981
ENSOMEP00000000348
GLI family zinc finger 3.
    
 0.964
SPOP
Speckle type BTB/POZ protein.
     
 0.952
ENSOMEP00000032544
GLI family zinc finger 2a.
    
 0.951
LOC112149657
CULLIN_2 domain-containing protein; Belongs to the cullin family.
     
 0.943
CUL3
Cullin 3; Belongs to the cullin family.
     
 0.938
kif7
Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.853
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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