STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112161061Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (810 aa)    
Predicted Functional Partners:
MMP11
Matrix metallopeptidase 11.
    
 0.830
LOC112148611
ZnMc domain-containing protein.
    
 0.789
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
  
 0.776
ENSOMEP00000024051
Fras1 related extracellular matrix 1a.
    
 0.764
ENSOMEP00000025575
Fras1 related extracellular matrix 1b.
    
 0.764
rxfp2
Relaxin family peptide receptor 2a.
  
 0.760
ENSOMEP00000020844
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
 0.760
rxfp1
Relaxin family peptide receptor 1.
  
 0.760
LOC112144325
Protein C (inactivator of coagulation factors Va and VIIIa), a.
  
 
 0.716
LOC112149754
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.707
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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