close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clrn2Clarin 2. (233 aa)    
Predicted Functional Partners:
LOC112143053
Uncharacterized protein.
    
 0.807
LOC112149634
CRK proto-oncogene, adaptor protein.
    
 0.807
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.807
ENSOMEP00000012931
Si:dkey-56f14.7.
    
 0.782
ELMO1
Engulfment and cell motility 1.
    
 0.782
elmo2
Engulfment and cell motility 2.
    
 0.782
LOC112152257
Engulfment and cell motility 3.
    
 0.782
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
   
  
 0.571
LOC112161950
Ras homolog family member Q.
   
 0.563
rhobtb3
Si:dkey-6b12.5.
   
 0.563
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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