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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001762Uncharacterized protein. (533 aa)    
Predicted Functional Partners:
LOC112160324
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.920
LOC112152213
Dual oxidase 2.
   
 0.894
ncf1
Neutrophil cytosolic factor 1.
   
 0.841
ncf4
Neutrophil cytosolic factor 4.
   
 0.829
ENSOMEP00000016588
Neutrophil cytosolic factor 2.
   
 0.809
LOC112137687
NADPH oxidase activator 1.
   
 0.796
LOC112156765
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
  
 
0.783
nox1
NADPH oxidase 1.
  
 
0.782
xkrx
XK-related protein.
 
  
 0.767
XK
XK-related protein.
 
  
 0.767
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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