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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112142476Solute carrier family 25 member 15b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (302 aa)    
Predicted Functional Partners:
ENSOMEP00000019982
N-acetylglutamate synthase.
   
  
 0.595
ca5a
Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family.
      
 0.563
ENSOMEP00000012213
Arginase.
      
 0.478
LOC112159373
Glutaminase 2a (liver, mitochondrial).
      
 0.475
LOC112162355
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a.
      
 0.475
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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