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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112142839Si:ch211-284e13.4. (1148 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.973
LOC112152311
Tyrosine-protein kinase receptor.
   
 0.955
insr
Tyrosine-protein kinase receptor.
   
 0.955
ENSOMEP00000032841
Tyrosine-protein kinase receptor.
   
 0.955
ENSOMEP00000002349
Uncharacterized protein.
    
 0.947
LOC112147562
Uncharacterized protein.
    
 0.947
LOC112138447
Uncharacterized protein.
    
 0.947
pik3r1
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
 0.947
pik3r3
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
 0.942
LOC112147412
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.937
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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