close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001822PID domain-containing protein. (89 aa)    
Predicted Functional Partners:
ENSOMEP00000009363
Uncharacterized protein.
   
 0.792
ENSOMEP00000009387
Uncharacterized protein.
   
 0.792
ENSOMEP00000015987
Uncharacterized protein.
   
 0.792
ENSOMEP00000016023
Uncharacterized protein.
   
 0.792
ENSOMEP00000027877
Uncharacterized protein.
   
 0.792
ENSOMEP00000032288
Uncharacterized protein.
   
 0.792
c7
Complement component 7a.
   
  0.778
ldlr
Low density lipoprotein receptor a.
    
 0.767
LOC112157423
Low density lipoprotein receptor b.
    
 0.767
ENSOMEP00000014699
Uncharacterized protein.
   
 0.742
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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