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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000001883Sin3A-associated protein a. (1025 aa)    
Predicted Functional Partners:
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.936
sap30l
Sap30-like.
    
 0.917
LOC112152434
SIN3-HDAC complex associated factor.
    
 
 0.852
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.849
ENSOMEP00000004096
Inhibitor of growth protein.
    
 
 0.828
cherp
Calcium homeostasis endoplasmic reticulum protein.
   
    0.772
ENSOMEP00000018723
Inhibitor of growth protein.
    
 
 0.766
ENSOMEP00000029020
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.766
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.757
LOC112160390
SIN3 transcription regulator family member Ab.
   
 0.746
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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