close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clstn1Calsyntenin 1. (981 aa)    
Predicted Functional Partners:
LOC112149744
Kinesin light chain 3.
    
 
 0.624
klc1
Kinesin light chain 1a.
    
 
 0.624
klc2
TPR_REGION domain-containing protein.
    
 
 0.624
LOC112162197
TPR_REGION domain-containing protein.
    
 
 0.624
ENSOMEP00000003860
Uncharacterized protein.
    
 
 0.584
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 
 0.476
LOC112162751
Tescalcin b.
      
 0.465
APP
Amyloid beta precursor protein.
   
 
 0.455
LOC112154862
Amyloid beta (A4) precursor protein b.
   
 
 0.455
ENSOMEP00000009353
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
    
 
 0.427
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: medium (46%) [HD]