Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC112150849Integrin beta; Belongs to the integrin beta chain family. (795 aa)    
Predicted Functional Partners:
itga3
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
   
 0.936
ENSOMEP00000013546
Integrin alpha 4; Belongs to the integrin alpha chain family.
   
 0.932
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
   
 0.932
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 0.917
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
   
 0.915
LOC112158870
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
   
 0.915
LOC112147446
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
   
 0.914
ENSOMEP00000003199
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
   
 0.913
ENSOMEP00000011079
Uncharacterized protein.
   
 0.913
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
   
 0.908
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.